Thursday, May 29, 2008

UP Online Bioinformatics System site!

UP Online Bioinformatics System is the integration of the three existing softwares developed by the three graduates of the University of the Philippines in Mindanao. These are the Parallel Computation of Nucleotide Mutation and Divergence Time Inferred from Phylogenetic Tree using Maximum Likelihood Method (Nucleotide MDT Computation) developed by Mr. Bernard Klinch S. Clarito II, another is A Working Space for Sequence Alignment and Detecting Informative Sites by Rona Polinar, and last but not the least Computation and Visualization of Synonymous and Nonsynonymous Substitution (CVSNOS) developed by Vennyl Dumajel.

This system uses Java Applet Technology being embedded in the page, thus, inorder to view the program the users need to install Java Plugin. Since this is an applet, Nucleotide MDT Computation which calls Phylip Programs, processing and loading its output takes some time.

Please take time to visit the site.. :)

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